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    Anatomic Pathology
    H188 Emory University Hospital
    Atlanta GA 30322

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    Alton Brad Farris, MD

    Renal Pathology

    Associate Professor
    Pathology & Laboratory Medicine

    Pathology Faculty Photo

    Pathology Division(s):
    Anatomic Pathology

    Email Address:


    B.S.   Millsaps College, Major: Chemistry (American Chemical Society), Minor: Computer Science (Honors, Summa Cum Laude, Phi Beta Kappa), 1996 - 2000

    M.D.   University of Mississippi Medical Center (Magna Cum Laude, Dean's Award, Alpha Omega Alpha), 2000 - 2004

    Resident   Massachusetts General Hospital, Anatomic and Clinical Pathology, 2004 - 2008

    Chief Resident   Massachusetts General Hospital, Anatomic Pathology, 2007 - 2008

    Fellow   Massachusetts General Hospital, Renal and Surgical (Gastrointestinal) Pathology, 2008 - 2009

    Graduate Assistant   Harvard Medical School, 2004 - 2009

    Research Interests:

    - Renal allograft pathology
    I am interested in the diverse spectrum seen in renal allograft pathology and how the changes interpreted by pathologists can impact renal allograft recipients. Recently my efforts in this regard have been the study of the chronic changes in renal allografts, particularly chronic antibody mediated (humoral) rejection.

    - Pathology Informatics
    I am interested in applying new technology in anatomic pathology. In particular, I have applied whole slide imaging to the analysis of renal biopsies to measure parameters such as fibrosis. I have also been involved in several studies in the surgical pathology subspecialties of gastrointestinal and pulmonary pathology where I have applied similar techniques. I hope that performing quantitative analysis on pathology specimens will eventually yield new insights, facilitate accurate diagnoses, and ultimately lead to optimal patient care.

    - Surgical Pathology
    I have been involved in investigating various topics in surgical pathology, particularly in gastrointestinal and pulmonary pathology. One focus of my research has been the study of incipient neoplasia and the application of immunohistochemistry and informatics methods to help understand various disorders in surgical pathology. I enjoy collaborating with suspecialists in these areas and helping them apply new methods to eventually discover novel insights.

    Clinical Focus:

    My primary clinical focus is renal allograft pathology, the diagnosis of medical renal disease, and the practice of surgical pathology, particularly gastrointestinal pathology. In the area of gastrointestinal pathology, I have become increasingly interested in the area of hepatic pathology and hepatic transplantation pathology.

    Honors / Awards:

    Chief Resident, Anatomic Pathology, Massachusetts General Hospital, 2008

    Specialty Boards:

    2008  Anatomic and Clinical Pathology

    Selected Publications:

    Published and Accepted Research Articles -

    Samy KP, Davis RP, Gao Q, Martin BM, Song M, Cano J, Farris AB, McDonald A, Gall EK, Dove CR, Leopardi FV, How T, Williams KD, Devi GR, Collins BH, Kirk AD. Early barriers to neonatal porcine islet engraftment in a dual transplant model. Am J Transplant. 2018 Apr;18(4):998-1006. doi: 10.1111/ajt.14601. Epub 2017 Dec 28. PubMed PMID: 29178588; PubMed Central PMCID: PMC5878697.

    Moon A, Smith GH, Kong J, Rogers TE, Ellis CL, Farris ABB 3rd. Development of CD3 cell quantitation algorithms for renal allograft biopsy rejection assessment utilizing open source image analysis software. Virchows Arch. 2018 Feb;472(2):259-269. doi: 10.1007/s00428-017-2260-6. Epub 2017 Nov 8. PubMed PMID: 29116389.

    Kwun J, Park J, Yi JS, Farris AB, Kirk AD, Knechtle SJ. IL-21 Biased Alemtuzumab Induced Chronic Antibody-Mediated Rejection Is Reversed by LFA-1 Costimulation Blockade. Front Immunol. 2018 Oct 15;9:2323. doi: 10.3389/fimmu.2018.02323. eCollection 2018. PubMed PMID: 30374350; PubMed Central PMCID: PMC6196291.

    Burghuber CK, Manook M, Ezekian B, Gibby AC, Leopardi FV, Song M, Jenks J, Saccoccio F, Permar S, Farris AB, Iwakoshi NN, Kwun J, Knechtle SJ. Dual targeting: Combining costimulation blockade and bortezomib to permit kidney transplantation in sensitized recipients. Am J Transplant. 2018 Aug 13. doi: 10.1111/ajt.15067. [Epub ahead of print] PubMed PMID: 30102844.

    Lyons JD, Chen CW, Liang Z, Zhang W, Chihade DB, Burd EM, Farris AB, Ford ML, Coopersmith CM. Murine Pancreatic Cancer Alters T Cell Activation and Apoptosis and Worsens Survival After Cecal Ligation and Puncture. Shock. 2018 Jun 20. doi: 10.1097/SHK.0000000000001203. [Epub ahead of print] PubMed PMID: 29889816.

    Klingensmith NJ, Chen CW, Liang Z, Burd EM, Farris AB, Arbiser JL, Ford ML, Coopersmith CM. Honokiol Increases CD4+ T Cell Activation and Decreases TNF but Fails to Improve Survival Following Sepsis. Shock. 2018 Aug;50(2):178-186. doi: 10.1097/SHK.0000000000001021. PubMed PMID: 29023360; PubMed Central PMCID: PMC5895534.

    Xue Y, Farris AB, Quigley B, Krasinskas A. The Impact of New Technologic and Molecular Advances in the Daily Practice of Gastrointestinal and Hepatobiliary Pathology. Arch Pathol Lab Med. 2017 Apr;141(4):517-527. doi: 10.5858/arpa.2016-0261-SA. Epub 2017 Feb 3. Review. PubMed PMID: 28157407.

    Manook M, Kwun J, Burghuber C, Samy K, Mulvihill M, Yoon J, Xu H, MacDonald AL, Freischlag K, Curfman V, Branum E, Howell D, Farris AB, Smith RA, Sacks S, Dorling A, Mamode N, Knechtle S. Thrombalexin: use of a cytotopic anticoagulant to reduce thrombotic microangiopathy in a highly sensitized model of kidney transplantation. Am J Transplant. 2017 Feb 22. doi: 10.1111/ajt.14234. [Epub ahead of print] PubMed PMID: 28226413.

    Samy KP, Anderson DJ, Lo DJ, Mulvihill MS, Song M, Farris AB, Parker BS, MacDonald AL, Lu C, Springer TA, Kachlany SC, Reimann KA, How T, Leopardi FV, Franke KS, Williams KD, Collins BH, Kirk AD. Selective Targeting of High-Affinity LFA-1 Does Not Augment Costimulation Blockade in a Nonhuman Primate Renal Transplantation Model. Am J Transplant. 2017 May;17(5):1193-1203. doi: 10.1111/ajt.14141. Epub 2017 Jan 27. PubMed PMID: 27888551; PubMed Central PMCID: PMC5409867.

    Kim SC, Wakwe W, Higginbotham LB, Mathews DV, Breeden CP, Stephenson AC, Jenkins J, Strobert E, Price K, Price L, Kuhn R, Wang H, Yamniuk A, Suchard S, Farris AB 3rd, Pearson TC, Larsen CP, Ford ML, Suri A, Nadler S, Adams AB. Fc-Silent Anti-CD154 Domain Antibody Effectively Prevents Non-Human Primate Renal Allograft Rejection. Am J Transplant. 2017 Jan 17. doi: 10.1111/ajt.14197. [Epub ahead of print] PubMed PMID: 28097811.

    Farris AB, Cohen C, Rogers TE, Smith GH. Whole Slide Imaging for Analytical Anatomic Pathology and Telepathology: Practical Applications Today, Promises, and Perils. Arch Pathol Lab Med. 2017 Apr;141(4):542-550. doi: 10.5858/arpa.2016-0265-SA. Epub 2017 Feb 3. PubMed PMID: 28157404.

    Prieto V, Ludwig JM, Farris AB, Nagaraju GP, Lawal TO, El-Rayes B, Kim HS. Establishment of human metastatic colorectal cancer model in rabbit liver: A pilot study. PLoS One. 2017 May 5;12(5):e0177212. doi: 10.1371/journal.pone.0177212. eCollection 2017. PubMed PMID: 28475639; PubMed Central PMCID: PMC5419650.

    Mathews DV, Wakwe WC, Kim SC, Lowe MC, Breeden C, Roberts ME, Farris AB, Strobert EA, Jenkins JB, Larsen CP, Ford ML, Townsend R, Adams AB. Belatacept Resistant Rejection is Associated with CD28(+) Memory CD8 T cells. Am J Transplant. 2017 May 14. doi: 10.1111/ajt.14349. [Epub ahead of print] PubMed PMID: 28502128.

    Newell KA, Mehta AK, Larsen CP, Stock PG, Farris AB, Mehta SG, Ikle D, Armstrong B, Morrison Y, Bridges N, Robien M, Mannon RB. Lessons learned: Early termination of a randomized trial of calcineurin inhibitor and corticosteroid avoidance using Belatacept. Am J Transplant. 2017 May 28. doi: 10.1111/ajt.14377. [Epub ahead of print] PubMed PMID: 28556519.

    Farris AB, Ellis CL, Rogers TE, Chon W James, Chang A, Meehan SM. Renal allograft granulomatous interstitial nephritis: observations of an uncommon injury pattern in 22 transplant recipients. Clin Kidney J. 2017 Apr;10(2):240-248. PubMed PMID: 28396741; PubMed Central PMCID: PMC5381240.

    Lorentz CA, Liang Z, Meng M, Chen CW, Yoseph BP, Breed ER, Mittal R, Klingensmith NJ, Farris AB, Burd EM, Koval M, Ford ML, Coopersmith CM. Myosin light chain kinase knockout improves gut barrier function and confers a survival advantage in polymicrobial sepsis. Mol Med. 2017 Jun 7;23. doi: 10.2119/molmed.2016.00256. [Epub ahead of print] PubMed PMID: 28598488.

    Kim SC, Wang J, Dong Y, Mathews DV, Albrecht JA, Breeden CP, Farris AB, Lukacher AE, Ford ML, Newell KA, Adams AB. Alloimmunity But Not Viral Immunity Promotes Allograft Loss in a Mouse Model of Polyomavirus-Associated Allograft Injury. Transplant Direct. 2017 May 12;3(6):e161. doi: 10.1097/TXD.0000000000000677. eCollection 2017 Jun. PubMed PMID: 28620645; PubMed Central PMCID: PMC5464780.

    Klingensmith NJ, Chen CW, Liang Z, Burd EM, Farris AB, Arbiser JL, Ford ML, Coopersmith CM. Honokiol Increases CD4+ T Cell Activation and Decreases TNF but Fails to Improve Survival Following Sepsis. Shock. 2017 Oct 11. doi: 10.1097/SHK.0000000000001021. [Epub ahead of print] PubMed PMID: 29023360.

    Kwun J, Burghuber C, Manook M, Ezekian B, Park J, Yoon J, Yi JS, Iwakoshi N, Gibby A, Hong JJ, Farris AB, Kirk AD, Knechtle SJ. Successful desensitization with proteasome inhibition and costimulation blockade in sensitized nonhuman primates. Blood Adv. 2017 Oct 26;1(24):2115-2119. doi: 10.1182/bloodadvances.2017010991. eCollection 2017 Nov 14. PubMed PMID: 29296858; PubMed Central PMCID: PMC5737135.

    Lyons JD, Mittal R, Fay KT, Chen CW, Liang Z, Margoles LM, Burd EM, Farris AB, Ford ML, Coopersmith CM. Murine Lung Cancer Increases CD4+ T Cell Apoptosis and Decreases Gut Proliferative Capacity in Sepsis. PLoS One. 2016 Mar 28;11(3):e0149069. doi: 10.1371/journal.pone.0149069. eCollection 2016. PubMed PMID: 27018973; PubMed Central PMCID: PMC4809578.

    Wang J, Farris AB, Xu K, Wang P, Zhang X, Duong DM, Yi H, Shu HK, Sun SY, Wang Y. GPRC5A suppresses protein synthesis at the endoplasmic reticulum to prevent radiation-induced lung tumorigenesis. Nat Commun. 2016 Jun 8;7:11795. PubMed PMID: 27273304.

    Ilori TO, Enofe N, Oommen A, Cobb J, Navarrete J, Adedinsewo DA, Oshikoya O, Fevrier H, Farris AB, Plantinga L, Ojo AO. Comparison of Outcomes between Individuals with Pure and Mixed Lupus Nephritis: A Retrospective Study. PLoS One. 2016 Jun 15;11(6):e0157485. doi: 10.1371/journal.pone.0157485. eCollection 2016. PubMed PMID: 27304068.

    Farris AB, Ellis CL, Rogers TE, Lawson D, Cohen C, Rosen S. Renal Medullary and Cortical Correlates in Fibrosis, Epithelial Mass, Microvascularity, and Microanatomy Using Whole Slide Image Analysis Morphometry. PLoS One. 2016 Aug 30;11(8):e0161019. doi: 10.1371/journal.pone.0161019. eCollection 2016. PubMed PMID: 27575381.

    Liapis H, Gaut JP, Klein C, Bagnasco S, Kraus E, Farris AB 3rd, Honsova E, Perkowska-Ptasinska A, David D, Goldberg J, Smith M, Mengel M, Haas M, Seshan S, Pegas KL, Horwedel T, Paliwa Y, Gao X, Landsittel D, Randhawa P; Banff Working Group. Banff histopathological consensus criteria for pre-implantation kidney biopsies. Am J Transplant. 2016 Jun 22. doi: 10.1111/ajt.13929. [Epub ahead of print] PubMed PMID: 27333454.

    Rahman K, Desai C, Iyer SS, Thorn NE, Kumar P, Liu Y, Smith T, Neish AS, Li H, Tan S, Wu P, Liu X, Yu Y, Farris AB, Nusrat A, Parkos CA, Anania FA. Loss of Junctional Adhesion Molecule A Promotes Severe Steatohepatitis in Mice on a Diet High in Saturated Fat, Fructose, and Cholesterol. Gastroenterology. 2016 Jun 21. pii: S0016-5085(16)34679-0. doi: 10.1053/j.gastro.2016.06.022. [Epub ahead of print] PubMed PMID: 27342212.

    Wang J, Zhang X, Wang P, Wang X, Farris AB 3rd, Wang Y. Lessons learned using different mouse models during space radiation-induced lung tumorigenesis experiments. Life Sci Space Res (Amst). 2016 Jun;9:48-55. doi: 10.1016/j.lssr.2016.04.002. Epub 2016 May 24. PubMed PMID: 27345200.

    Martin DR, Braxton DR, Farris AB. Dysplasia discrimination in intestinal-type neoplasia of the esophagus and colon via digital image analysis. Virchows Arch. 2016 Aug 5. [Epub ahead of print] PubMed PMID: 27492044.

    Talbert EE, Yang J, Mace TA, Farren MR, Farris AB, Young GS, Elnaggar O, Che Z, Timmers CD, Rajasekera P, Maskarinec JM, Bloomston M, Bekaii-Saab T, Guttridge DC, Lesinski GB. Dual Inhibition of MEK and PI3K/Akt Rescues Cancer Cachexia through Both Tumor Extrinsic and Intrinsic Activities. Mol Cancer Ther. 2016 Nov 3. pii: molcanther.0337.2016. [Epub ahead of print] PubMed PMID: 27811010.

    Espinosa J, Herr F, Tharp G, Bosinger S, Song M, Farris AB 3rd, George R, Cheeseman J, Stempora L, Townsend R, Durrbach A, Kirk AD. CD57(+) CD4 T Cells Underlie Belatacept-Resistant Allograft Rejection. Am J Transplant. 2016 Apr;16(4):1102-12. doi: 10.1111/ajt.13613. Epub 2016 Jan 14. PubMed PMID: 26603381; PubMed Central PMCID: PMC4867077.

    Mwangi SM, Peng S, Nezami BG, Thorn N, Farris AB 3rd, Jain S, Laroui H, Merlin D, Anania F, Srinivasan S. Glial cell line-derived neurotrophic factor protects against high-fat diet-induced hepatic steatosis by suppressing hepatic PPAR-¿ expression. Am J Physiol Gastrointest Liver Physiol. 2016 Jan 15;310(2):G103-16. doi: 10.1152/ajpgi.00196.2015. Epub 2015 Nov 12. PubMed PMID: 26564715; PubMed Central PMCID: PMC4719063.

    Phadke VK, Friedman-Moraco RJ, Quigley BC, Farris AB, Norvell JP. Concomitant herpes simplex virus colitis and hepatitis in a man with ulcerative colitis: Case report and review of the literature. Medicine (Baltimore). 2016 Oct;95(42):e5082. PubMed PMID: 27759636; PubMed Central PMCID: PMC5079320.

    Rahman K, Liu Y, Kumar P, Smith T, Thorn NE, Farris AB, Anania FA. C/EBP homologous protein modulates liraglutide-mediated attenuation of non-alcoholic steatohepatitis. Lab Invest. 2016 May 30. doi: 10.1038/labinvest.2016.61. [Epub ahead of print] PubMed PMID: 27239734.

    Burghuber CK, Kwun J, Page EJ, Manook M, Gibby AC, Leopardi FV, Song M, Farris AB 3rd, Hong JJ, Villinger F, Adams AB, Iwakoshi NN, Knechtle SJ. Antibody-Mediated Rejection in Sensitized Nonhuman Primates: Modeling Human Biology. Am J Transplant. 2016 Jun;16(6):1726-38. doi: 10.1111/ajt.13688. Epub 2016 Mar 25. PubMed PMID: 26705099; PubMed Central PMCID: PMC4874845.

    Hawk NN, Long TE, Imam MH, Mathew BM, Kim S, Chen Z, Goodman M, Sullivan P, Brutcher E, Kauh J, Maithel SK, Adsay VN, Farris AB, Staley C, El-Rayes BF. Clinicopathologic Features and Outcome of Young Adults With Stage IV Colorectal Cancer. Am J Clin Oncol. 2015 Dec;38(6):543-9. doi: 10.1097/01.coc.0000437899.28701.03. PubMed PMID: 24662267.

    Kwun J, Page E, Hong JJ, Gibby A, Yoon J, Farris AB, Villinger F, Knechtle S. Neutralizing BAFF/APRIL with atacicept prevents early DSA formation and AMR development in T cell depletion induced nonhuman primate AMR model. Am J Transplant. 2015 Mar;15(3):815-22. doi: 10.1111/ajt.13045. Epub 2015 Feb 12. PubMed PMID: 25675879.

    Campbell PT, Newton CC, Newcomb PA, Phipps AI, Ahnen DJ, Baron JA, Buchanan DD, Casey G, Cleary SP, Cotterchio M, Farris AB, Figueiredo JC, Gallinger S, Green RC, Haile RW, Hopper JL, Jenkins MA, Le Marchand L, Makar KW, McLaughlin JR, Potter JD, Renehan AG, Sinicrope FA, Thibodeau SN, Ulrich CM, Win AK, Lindor NM, Limburg PJ. Association between body mass index and mortality for colorectal cancer survivors: overall and by tumor molecular phenotype. Cancer Epidemiol Biomarkers Prev. 2015 Jun 2. pii: cebp.0094.2015. [Epub ahead of print] PubMed PMID: 26038390.

    Kwun J, Farris AB, Song H, Mahle WT, Burlingham WJ, Knechtle SJ. Impact of Leukocyte Function-associated Antigen-1 Blockade on Endogenous Allospecific T Cells to Multiple Minor Histocompatibility Antigen Mismatched Cardiac Allograft. Transplantation. 2015 Jun 22. [Epub ahead of print] PubMed PMID: 26102611.

    Freitas AM, Samy KP, Farris AB, Leopardi FV, Song M, Stempora L, Strobert EA, Jenkins JA, Kirk AD, Cendales LC. Studies Introducing Costimulation Blockade for Vascularized Composite Allografts in Nonhuman Primates. Am J Transplant. 2015 Jul 2. doi: 10.1111/ajt.13379. [Epub ahead of print] PubMed PMID: 26139552.

    Farris AB, Alpers CE. What is the best way to measure renal fibrosis?: A pathologist's perspective. Kidney Int Suppl (2011). 2014 Nov;4(1):9-15. Review. PubMed PMID: 26312144; PubMed Central PMCID: PMC4536972.

    Becker-Weidman D, Kalb B, Mittal PK, Harri PA, Arif-Tiwari H, Farris AB 3rd, Chen Z, Sungjin K, Martin DR. Differentiation of lipid-poor adrenal adenomas from non-adenomas with magnetic resonance imaging: Utility of dynamic, contrast enhancement and single-shot T2-weighted sequences. Eur J Radiol. 2015 Jul 23. pii: S0720-048X(15)30039-5. doi: 10.1016/j.ejrad.2015.06.032. [Epub ahead of print] PubMed PMID: 26233268.

    Higginbotham L, Mathews D, Breeden CA, Song M, Farris AB 3rd, Larsen CP, Ford ML, Lutz AJ, Tector M, Newell KA, Tector AJ, Adams AB. Pre-transplant antibody screening and anti-CD154 costimulation blockade promote long-term xenograft survival in a pig-to-primate kidney transplant model. Xenotransplantation. 2015 Apr 3. doi: 10.1111/xen.12166. [Epub ahead of print] PubMed PMID: 25847130.

    Lo DJ, Anderson DJ, Song M, Leopardi F, Farris AB, Strobert E, Chapin S, Devens B, Karrer E, Kirk AD. A Pilot Trial Targeting the ICOS-ICOS-L Pathway in Nonhuman Primate Kidney Transplantation. Am J Transplant. 2015 Apr;15(4):984-92. doi: 10.1111/ajt.13100. Epub 2015 Feb 20. PubMed PMID: 25703015.

    Nagaraju GP, Long TE, Park W, Landry JC, Taliaferro-Smith L, Farris AB, Diaz R, El-Rayes BF. Heat shock protein 90 promotes epithelial to mesenchymal transition, invasion, and migration in colorectal cancer. Mol Carcinog. 2015 Oct;54(10):1147-58. doi: 10.1002/mc.22185. Epub 2014 May 27. PubMed PMID: 24861206.

    Martin BM, Samy KP, Lowe MC, Thompson PW, Cano J, Farris AB, Song M, Dove CR, Leopardi FV, Strobert EA, Jenkins JB, Collins BH, Larsen CP, Kirk AD. Dual islet transplantation modeling of the instant blood-mediated inflammatory reaction. Am J Transplant. 2015 May;15(5):1241-52. doi: 10.1111/ajt.13098. Epub 2015 Feb 19. PubMed PMID: 25702898.

    Farris AB, Chan S, Climenhaga J, Adam B, Bellamy CO, Serón D, Colvin RB, Reeve J, Mengel M. Banff fibrosis study: multicenter visual assessment and computerized analysis of interstitial fibrosis in kidney biopsies. Am J Transplant. 2014 Apr;14(4):897-907. doi: 10.1111/ajt.12641. Epub 2014 Feb 20. PubMed PMID: 24712330.

    Nezami BG, Mwangi SM, Lee JE, Jeppsson S, Anitha M, Yarandi SS, Farris AB 3rd, Srinivasan S. MicroRNA 375 Mediates Palmitate-Induced Enteric Neuronal Damage and High-Fat Diet-Induced Delayed Intestinal Transit in Mice. Gastroenterology. 2014 Feb;146(2):473-483.e3. doi: 10.1053/j.gastro.2013.10.053. Epub 2013 Oct 25. PubMed PMID: 24507550; PubMed Central PMCID: PMC3920196.

    Haas M, Sis B, Racusen LC, Solez K, Glotz D, Colvin RB, Castro MC, David DS, David-Neto E, Bagnasco SM, Cendales LC, Cornell LD, Demetris AJ, Drachenberg CB, Farver CF, Farris AB 3rd, Gibson IW, Kraus E, Liapis H, Loupy A, Nickeleit V, Randhawa P, Rodriguez ER, Rush D, Smith RN, Tan CD, Wallace WD, Mengel M; as the Banff meeting report writing committee. Banff 2013 meeting report: inclusion of c4d-negative antibody-mediated rejection and antibody-associated arterial lesions. Am J Transplant. 2014 Feb;14(2):272-83. doi: 10.1111/ajt.12590. PubMed PMID: 24472190.

    Mori M, Aguirre AJ, Elder RW, Kashkouli A, Farris AB, Ford RM, Book WM. Beyond a Broken Heart: Circulatory Dysfunction in the Failing Fontan. Pediatr Cardiol. 2014 Feb 15. [Epub ahead of print] PubMed PMID: 24531876.

    Shaib W, Sharma R, Mosunjac M, Farris AB 3rd, El Rayes B. Hepatoid Adenocarcinoma of the Lung: A Case Report and Review of the Literature. J Gastrointest Cancer. 2014 Jan 10. [Epub ahead of print] PubMed PMID: 24408270.

    Kim EJ, Kwun J, Gibby AC, Hong JJ, Farris AB 3rd, Iwakoshi NN, Villinger F, Kirk AD, Knechtle SJ. Costimulation blockade alters germinal center responses and prevents antibody-mediated rejection. Am J Transplant. 2014 Jan;14(1):59-69. doi: 10.1111/ajt.12526. PubMed PMID: 24354871.

    Lo DJ, Farris AB, Song M, Leopardi F, Anderson DJ, Strobert EA, Ramakrishnan S, Turgeon NA, Mehta AK, Turnbull B, Maroni B, Violette SM, Kirk AD. Inhibition of ¿vß6 promotes acute renal allograft rejection in nonhuman primates. Am J Transplant. 2013 Dec;13(12):3085-93. doi: 10.1111/ajt.12467. Epub 2013 Oct 1. PubMed PMID: 24119188.

    Dominguez JA, Samocha AJ, Liang Z, Burd EM, Farris AB, Coopersmith CM. Inhibition of IKKß in enterocytes exacerbates sepsis-induced intestinal injury and worsens mortality. Crit Care Med. 2013 Oct;41(10):e275-85. doi: 10.1097/CCM.0b013e31828a44ed. PubMed PMID: 23939348; PubMed Central PMCID: PMC3823541.

    Campbell PT, Deka A, Briggs P, Cicek M, Farris AB, Gaudet MM, Jacobs EJ, Newton CC, Patel AV, Teras LR, Thibodeau SN, Tillmans L, Gapstur SM. Establishment of the Cancer Prevention Study II Nutrition Cohort Colorectal Tissue Repository. Cancer Epidemiol Biomarkers Prev. 2014 Dec;23(12):2694-702. doi: 10.1158/1055-9965.EPI-14-0541. PubMed PMID: 25472679.

    Liang Z, Xie Y, Dominguez JA, Breed ER, Yoseph BP, Burd EM, Farris AB, Davidson NO, Coopersmith CM. Intestine-specific deletion of microsomal triglyceride transfer protein increases mortality in aged mice. PLoS One. 2014 Jul 10;9(7):e101828. doi: 10.1371/journal.pone.0101828. eCollection 2014. PubMed PMID: 25010671; PubMed Central PMCID: PMC4092051.

    Braxton DR, Nickleach DC, Liu Y, Farris AB 3rd. Necrotizing sialometaplasia-like change of the esophageal submucosal glands is associated with Barrett's esophagus. Virchows Arch. 2014 Aug;465(2):135-43. doi: 10.1007/s00428-014-1590-x. Epub 2014 May 27. PubMed PMID: 24863247.

    Mittal R, Wagener M, Breed ER, Liang Z, Yoseph BP, Burd EM, Farris AB 3rd, Coopersmith CM, Ford ML. Phenotypic T cell exhaustion in a murine model of bacterial infection in the setting of pre-existing malignancy. PLoS One. 2014 May 5;9(5):e93523. doi: 10.1371/journal.pone.0093523. eCollection 2014. PubMed PMID: 24796533; PubMed Central PMCID: PMC4010417.

    Squires MH 3rd, Fisher SB, Fisher KE, Patel SH, Kooby DA, El-Rayes BF, Staley CA 3rd, Farris AB 3rd, Maithel SK. Differential expression and prognostic value of ERCC1 and thymidylate synthase in resected gastric adenocarcinoma. Cancer. 2013 May 29. doi: 10.1002/cncr.28175. [Epub ahead of print] PubMed PMID: 23719746.

    Fisher SB, Fisher KE, Squires MH 3rd, Patel SH, Kooby DA, El-Rayes BF, Cardona K, Russell MC, Staley CA 3rd, Farris AB 3rd, Maithel SK. HER2 in resected gastric cancer: Is there prognostic value? J Surg Oncol. 2014 Feb;109(2):61-6. doi: 10.1002/jso.23456. Epub 2013 Oct 10. PubMed PMID: 24122802.

    Lo DJ, Anderson DJ, Weaver TA, Leopardi F, Song M, Farris AB, Strobert EA, Jenkins J, Turgeon NA, Mehta AK, Larsen CP, Kirk AD. Belatacept and sirolimus prolong nonhuman primate renal allograft survival without a requirement for memory T cell depletion. Am J Transplant. 2013 Feb;13(2):320-8. doi: 10.1111/j.1600-6143.2012.04342.x. Epub 2013 Jan 11. PubMed PMID: 23311611; PubMed Central PMCID: PMC3558532.

    Hassan HA, Majid RA, Rashid NG, Nuradeen BE, Abdulkarim QH, Hawramy TA, Rashid RM, Farris AB, Guarner J, Hughson MD. Eosinophilic granulomatous gastrointestinal and hepatic abscesses attributable to basidiobolomycosis and fasciolias: a simultaneous emergence in Iraqi Kurdistan. BMC Infect Dis. 2013 Feb 20;13:91. doi: 10.1186/1471-2334-13-91. PubMed PMID: 23421741; PubMed Central PMCID: PMC3583806.

    Yoseph BP, Breed E, Overgaard CE, Ward CJ, Liang Z, Wagener ME, Lexcen DR, Lusczek ER, Beilman GJ, Burd EM, Farris AB, Guidot DM, Koval M, Ford ML, Coopersmith CM. Chronic alcohol ingestion increases mortality and organ injury in a murine model of septic peritonitis. PLoS One. 2013 May 22;8(5):e62792. doi: 10.1371/journal.pone.0062792. Print 2013. PubMed PMID: 23717394; PubMed Central PMCID: PMC3661585.

    Nagaraju GP, Zhu S, Wen J, Farris AB, Adsay VN, Diaz R, Snyder JP, Mamoru S, El-Rayes BF. Novel synthetic curcumin analogues EF31 and UBS109 are potent DNA hypomethylating agents in pancreatic cancer. Cancer Lett. 2013 Dec 1;341(2):195-203. doi: 10.1016/j.canlet.2013.08.002. Epub 2013 Aug 7. PubMed PMID: 23933177.

    Lee MJ, Bagci P, Kong J, Vos MB, Sharma P, Kalb B, Saltz JH, Martin DR, Adsay NV, Farris AB. Liver steatosis assessment: Correlations among pathology, radiology, clinical data and automated image analysis software. Pathol Res Pract. 2013 Jun;209(6):371-379. doi: 10.1016/j.prp.2013.04.001. Epub 2013 Apr 17. PubMed PMID: 23707550.

    Nagaraju GP, Park W, Wen J, Mahaseth H, Landry J, Farris AB, Willingham F, Sullivan PS, Proia DA, El-Hariry I, Taliaferro-Smith L, Diaz R, El-Rayes BF. Antiangiogenic effects of ganetespib in colorectal cancer mediated through inhibition of HIF-1¿ and STAT-3. Angiogenesis. 2013 Oct;16(4):903-17. doi: 10.1007/s10456-013-9364-7. Epub 2013 Jul 10. Erratum in: Angiogenesis. 2013 Oct;16(4):919. Ganji, Purnachandra Nagaraju [corrected to Nagaraju, Ganji Purnachandra]. PubMed PMID: 23838996.

    Ramakrishnan SK, Page A, Farris AB 3rd, Singh K, Leopardi F, Hamby K, Sen S, Polnett A, Deane T, Song M, Stempora L, Strobert E, Kirk AD, Larsen CP, Kean LS. Evidence for kidney rejection after combined bone marrow and renal transplantation despite ongoing whole-blood chimerism in rhesus macaques. Am J Transplant. 2012 Jul;12(7):1755-64. doi: 10.1111/j.1600-6143.2012.04045.x. Epub 2012 May 29. PubMed PMID: 22642491; PubMed Central PMCID: PMC3387328.

    Dong F, Wang C, Farris AB, Wu S, Lee H, Olumi AF, McDougal WS, Young RH, Wu CL. Impact on the clinical outcome of prostate cancer by the 2005 international society of urological pathology modified Gleason grading system. Am J Surg Pathol. 2012 Jun;36(6):838-43. PubMed PMID: 22592143.

    Hassan HA, Majid RA, Rashid NG, Nuradeen BE, Abdulkarim QH, Hawramy TA, Rashid RM, Farris AB, Guarner J, Hughson MD. Eosinophilic granulomatous gastrointestinal and hepatic abscesses attributable to basidiobolomycosis and fasciolias: a simultaneous emergence in Iraqi Kurdistan. BMC Infect Dis. 2013 Feb 20;13(1):91. [Epub ahead of print] PubMed PMID: 23421741.

    Martin DR, Lauenstein T, Kalb B, Lurie C, Kitajima H, Sharma P, Salman K, Moreira R, Farris AB 3rd, Spivey J, Martinez E, Hanish S, Adsay V. Liver MRI and histological correlates in chronic liver disease on multiphase gadolinium-enhanced 3D gradient echo imaging. J Magn Reson Imaging. 2012 May 7. [Epub ahead of print] PubMed PMID: 22566123.

    Smith RN, Malik F, Goes N, Farris AB, Zorn E, Saidman S, Tolkoff-Rubin N, Puri S, Wong W. Partial therapeutic response to Rituximab for the treatment of chronic alloantibody mediated rejection of kidney allografts. Transpl Immunol. 2012 Oct;27(2-3):107-13. doi: 10.1016/j.trim.2012.08.005. Epub 2012 Aug 30. PubMed PMID: 22960786.

    Lawal TO, Farris AB, El-Rayes BF, Subramanian RM, Kim HS. Oxaliplatin-Induced Hepatoportal Sclerosis, Portal Hypertension, and Variceal Bleeding Successfully Treated With Transjugular Intrahepatic Portosystemic Shunt. Clin Colorectal Cancer. 2012 Apr 24. [Epub ahead of print] PubMed PMID: 22537609.

    Farris AB 3rd, Dursun N, Dhanasekaran R, Coban I, McIntosh EB, Adsay NV, Kim HS. Tumoral and angiogenesis factors in hepatocellular carcinoma after locoregional therapy. Pathol Res Pract. 2012 Jan 15;208(1):15-21. Epub 2011 Nov 15. PubMed PMID: 22088254.

    Kwun J, Oh BC, Gibby AC, Ruhil R, Lu VT, Kim DW, Page EK, Bulut OP, Song MQ, Farris AB, Kirk AD, Knechtle SJ, Iwakoshi NN. Patterns of de novo allo B cells and antibody formation in chronic cardiac allograft rejection after alemtuzumab treatment. Am J Transplant. 2012 Oct;12(10):2641-51. doi: 10.1111/j.1600-6143.2012.04181.x. Epub 2012 Jul 3. PubMed PMID: 22759336.

    Fisher SB, Fisher KE, Patel SH, Lim MG, Kooby DA, El-Rayes BF, Staley CA 3rd, Adsay NV, Farris AB 3rd, Maithel SK. Excision repair cross-complementing gene-1, ribonucleotide reductase subunit M1, ribonucleotide reductase subunit M2, and human equilibrative nucleoside transporter-1 expression and prognostic value in biliary tract malignancy. Cancer. 2013 Jan 15;119(2):454-62. doi: 10.1002/cncr.27739. Epub 2012 Jul 3. PubMed PMID: 22760605

    Jung E, Perrone EE, Liang Z, Breed ER, Dominguez JA, Clark AT, Fox AC, Dunne WM, Burd EM, Farris AB, Hotchkiss RS, Coopersmith CM. Cecal ligation and puncture followed by methicillin-resistant Staphylococcus aureus pneumonia increases mortality in mice and blunts production of local and systemic cytokines. Shock. 2012 Jan;37(1):85-94. PubMed PMID: 21937950; PubMed Central PMCID: PMC3241900.

    McCabe N, Farris AB, Hon H, Ford R, Book WM. Hepatocellular Carcinoma in an Adult with Repaired Tetralogy of Fallot. Congenit Heart Dis. 2012 Aug 16. doi: 10.1111/j.1747-0803.2012.00700.x. [Epub ahead of print] PubMed PMID: 22897884.

    Farris AB, Colvin RB. Renal interstitial fibrosis: mechanisms and evaluation. Curr Opin Nephrol Hypertens. 2012 May;21(3):289-300. PubMed PMID: 22449945; PubMed Central PMCID: PMC3354760.

    Drachenberg CB, Torrealba JR, Nankivell BJ, Rangel EB, Bajema IM, Kim DU, Arend L, Bracamonte ER, Bromberg JS, Bruijn JA, Cantarovich D, Chapman JR, Farris AB, Gaber L, Goldberg JC, Haririan A, Honsová E, Iskandar SS, Klassen DK, Kraus E, Lower F, Odorico J, Olson JL, Mittalhenkle A, Munivenkatappa R, Paraskevas S, Papadimitriou JC, Randhawa P, Reinholt FP, Renaudin K, Revelo P, Ruiz P, Samaniego MD, Shapiro R, Stratta RJ, Sutherland DE, Troxell ML, Voska L, Seshan SV, Racusen LC, Bartlett ST. Guidelines for the diagnosis of antibody-mediated rejection in pancreas allografts-updated Banff grading schema. Am J Transplant. 2011 Sep;11(9):1792-802. Epub 2011 Aug 3. PubMed PMID: 21812920.

    Soucy G, Wang HH, Farraye FA, Schmidt JF, Farris AB, Lauwers GY, Cerda SR, Dendrinos KG, Odze RD. Clinical and pathological analysis of colonic Crohn's disease, including a subgroup with ulcerative colitis-like features. Mod Pathol. 2012 Feb;25(2):295-307. Epub 2011 Aug 12. PubMed PMID: 21841769.

    Becker-Weidman DJ, Kalb B, Sharma P, Kitajima HD, Lurie CR, Chen Z, Spivey JR, Knechtle SJ, Hanish SI, Adsay NV, Farris AB 3rd, Martin DR. Hepatocellular carcinoma lesion characterization: single-institution clinical performance review of multiphase gadolinium-enhanced MR imaging--comparison to prior same-center results after MR systems improvements. Radiology. 2011 Dec;261(3):824-33. Epub 2011 Oct 3. PubMed PMID: 21969663.

    Hossain MS, Jaye DL, Pollack BP, Farris AB, Tselanyane ML, David E, Roback JD, Gewirtz AT, Waller EK. Flagellin, a TLR5 agonist, reduces graft-versus-host disease in allogeneic hematopoietic stem cell transplantation recipients while enhancing antiviral immunity. J Immunol. 2011 Nov 15;187(10):5130-40. Epub 2011 Oct 17. PubMed PMID: 22013117; PubMed Central PMCID: PMC3265143.

    Hung OY, Maithel SK, Willingham FF, Farris AB 3rd, Kauh JS. Hypergastrinemia, Type 1 Gastric Carcinoid Tumors: Diagnosis and Management. J Clin Oncol. 2011 Jul 11. [Epub ahead of print] PubMed PMID: 21747088.

    Farris AB 3rd, Demicco EG, Le LP, Finberg KE, Miller J, Mandal R, Fukuoka J, Cohen C, Gaissert HA, Zukerberg LR, Lauwers GY, Iafrate AJ, Mino-Kenudson M. Clinicopathologic and Molecular Profiles of Microsatellite Unstable Barrett Esophagus-associated Adenocarcinoma. Am J Surg Pathol. 2011 May;35(5):647-55. PubMed PMID: 21422910.

    McConnell KW, Fox AC, Clark AT, Chang NY, Dominguez JA, Farris AB, Buchman TG, Hunt CR, Coopersmith CM. The role of heat shock protein 70 in mediating age-dependent mortality in sepsis. J Immunol. 2011 Mar 15;186(6):3718-25. Epub 2011 Feb 4. PubMed PMID: 21296977

    Farris AB, Adams CD, Brousaides N, Della Pelle PA, Collins AB, Moradi E, Smith RN, Grimm PC, Colvin RB. Morphometric and visual evaluation of fibrosis in renal biopsies. J Am Soc Nephrol. 2011 Jan;22(1):176-86. Epub 2010 Nov 29. PubMed PMID: 21115619; PubMed Central PMCID: PMC3014046.

    Wang F, Kong J, Cooper L, Pan T, Kurc T, Chen W, Sharma A, Niedermayr C, Oh TW, Brat D, Farris AB, Foran DJ, Saltz J. A data model and database for high-resolution pathology analytical image informatics. J Pathol Inform. 2011;2:32. Epub 2011 Jul 26. PubMed PMID: 21845230; PubMed Central PMCID: PMC3153692.

    Fox AC, Breed ER, Liang Z, Clark AT, Zee-Cheng BR, Chang KC, Dominguez JA, Jung E, Dunne WM, Burd EM, Farris AB, Linehan DC, Coopersmith CM. Prevention of lymphocyte apoptosis in septic mice with cancer increases mortality. J Immunol. 2011 Aug 15;187(4):1950-6. Epub 2011 Jul 6. PubMed PMID: 21734077.

    Baid-Agrawal S, Farris AB 3rd, Pascual M, Mauiyyedi S, Farrell ML, Tolkoff-Rubin N, Collins AB, Frei U, Colvin RB. Overlapping pathways to transplant glomerulopathy: chronic humoral rejection, hepatitis C infection, and thrombotic microangiopathy. Kidney Int. 2011 Jun 22. doi: 10.1038/ki.2011.194. [Epub ahead of print] PubMed PMID: 21697808.

    Farris AB, Taheri D, Kawai T, Fazlollahi L, Wong W, Tolkoff-Rubin N, Spitzer TR, Iafrate AJ, Preffer FI, Locascio SA, Sprangers B, Saidman S, Smith RN, Cosimi AB, Sykes M, Sachs DH, Colvin RB. Acute renal endothelial injury during marrow recovery in a cohort of combined kidney and bone marrow allografts. Am J Transplant. 2011 Jul;11(7):1464-77. doi: 10.1111/j.1600-6143.2011.03572.x. Epub 2011 Jun 10. PubMed PMID: 21668634; PubMed Central PMCID: PMC3128680.

    Patel SH, Kneuertz PJ, Delgado M, Kooby DA, Staley CA 3rd, El-Rayes BF, Kauh JS, Sarmiento JM, Hanish S, Cohen C, Farris AB 3rd, Maithel SK. Clinically Relevant Biomarkers to Select Patients for Targeted Inhibitor Therapy after Resection of Hepatocellular Carcinoma. Ann Surg Oncol. 2011 May 18. [Epub ahead of print] PubMed PMID: 21590454

    Demicco EG, Farris AB 3rd, Baba Y, Agbor-Etang B, Bergethon K, Mandal R, Daives D, Fukuoka J, Shimizu M, Dias-Santagata D, Ogino S, Iafrate AJ, Gaissert HA, Mino-Kenudson M. The dichotomy in carcinogenesis of the distal esophagus and esophagogastric junction: intestinal-type vs cardiac-type mucosa-associated adenocarcinoma. Mod Pathol. 2011 May 13. [Epub ahead of print] PubMed PMID: 21572404.

    Farris AB, Lauwers GY, Deshpande V. Autoimmune pancreatitis-related diabetes: quantitative analysis of endocrine islet cells and inflammatory infiltrate. Virchows Arch. 2010 Sep;457(3):329-36. Epub 2010 Jul 15. PubMed PMID: 20632032.

    Herlitz LC, Markowitz GS, Farris AB, Schwimmer JA, Stokes MB, Kunis C, Colvin RB, D'Agati VD. Development of focal segmental glomerulosclerosis after anabolic steroid abuse. J Am Soc Nephrol. 2010 Jan;21(1):163-72. Epub 2009 Nov 16. PubMed PMID: 19917783; PubMed Central PMCID: PMC2799287.

    Schröppel B, Krüger B, Walsh L, Yeung M, Harris S, Garrison K, Himmelfarb J, Lerner SM, Bromberg JS, Zhang PL, Bonventre JV, Wang Z, Farris AB, Colvin RB, Murphy BT, Vella JP. Tubular expression of KIM-1 does not predict delayed function after transplantation. J Am Soc Nephrol. 2010 Mar;21(3):536-42. Epub 2009 Dec 17. PubMed PMID: 20019169; PubMed Central PMCID: PMC2831861.

    Colvin RB, Hirohashi T, Farris AB, Minnei F, Collins AB, Smith RN. Emerging role of B cells in chronic allograft dysfunction. Kidney Int Suppl. 2010 Dec;(119):S13-7. Review. PubMed PMID: 21116310.

    Koreishi AF, Nazarian RM, Saenz AJ, Klepeis VE, McDonald AG, Farris AB, Colvin RB, Duncan LM, Mandal RV, Kay J. Nephrogenic systemic fibrosis: a pathologic study of autopsy cases. Arch Pathol Lab Med. 2009 Dec;133(12):1943-8. PubMed PMID: 19961249.

    Wang WL, Farris AB, Lauwers GY, Deshpande V. Autoimmune pancreatitis-related cholecystitis: a morphologically and immunologically distinctive form of lymphoplasmacytic sclerosing cholecystitis. Histopathology. 2009 Jun;54(7):829-36.

    Farris AB 3rd, Hasserjian RP, Zukerberg LR, Amrein PC, Greene RE, Mark EJ, Kradin RL. Diffuse cellular and fibrosing interstitial pneumonitis with desquamative interstitial pneumonitis-like features associated with myeloid neoplasia. Am J Surg Pathol. 2009 Oct;33(10):1485-93. PubMed PMID: 19654503.

    Neilson EG, Farris AB. Case records of the Massachusetts General Hospital. Case 21-2009. A 61-year-old woman with abdominal pain, weight loss, and renal failure. N Engl J Med. 2009 Jul 9;361(2):179-87. PubMed PMID: 19587344.

    Farris AB, Lauwers GY, Ferry JA, Zukerberg LR. The rectal tonsil: a reactive lymphoid proliferation that may mimic lymphoma. Am J Surg Pathol. 2008 Jul;32(7):1075-9. PubMed PMID: 18520440.

    IJpelaar DH, Farris AB, Goemaere N, Amann K, Goldschmeding R, Nguyen TQ, Farkash E, van den Heuvel MC, de Heer E, Bruijn JA, Colvin RB, Bajema IM. Fidelity and evolution of recurrent FSGS in renal allografts. J Am Soc Nephrol. 2008 Nov;19(11):2219-24. Epub 2008 Jun 25. PubMed PMID: 18579640; PubMed Central PMCID: PMC2573002.

    Farris AB, Misdraji J, Srivastava A, Muzikansky A, Deshpande V, Lauwers GY, Mino-Kenudson M. Sessile serrated adenoma: challenging discrimination from other serrated colonic polyps. Am J Surg Pathol. 2008 Jan;32(1):30-5. PubMed PMID:18162767.

    Lewandrowski K, Flood J, Finn C, Tannous B, Farris AB, Benzer TI, Lee-Lewandrowski E. Implementation of point-of-care rapid urine testing for drugs of abuse in the emergency department of an academic medical center: impact on test utilization and ED length of stay. Am J Clin Pathol. 2008 May;129(5):796-801. PubMed PMID: 18426741.

    Farris AB, Mark EJ, Kradin RL. Pulmonary "inflammatory myofibroblastic" tumors: a critical examination of the diagnostic category based on quantitative immunohistochemical analysis. Virchows Arch. 2007 May;450(5):585-90. Epub 2007 Mar 20. PubMed PMID: 17372757.

    Farris AB, Kradin RL. Follicular localization of dendritic cells in a xanthomatous inflammatory tumor of lung associated with human herpes virus-8 infection. Virchows Arch. 2006 Dec;449(6):726-9. Epub 2006 Nov 8. PubMed PMID: 17106709.

    Hughson M, Farris AB 3rd, Douglas-Denton R, Hoy WE, Bertram JF. Glomerular number and size in autopsy kidneys: the relationship to birth weight. Kidney Int. 2003 Jun;63(6):2113-22. PubMed PMID: 12753298.

    Ward TJ, Farris AB. Chiral separations using the macrocyclic antibiotics: a review. J Chromatogr A. 2001 Jan 12;906(1-2):73-89. Review. PubMed PMID: 11215904.

    Ward TJ, Farris AB, Woodling K. Synergistic chiral separations using the glycopeptides ristocetin A and vancomycin. J Biochem Biophys Methods. 2001 Apr 24;48(2):163-74. PubMed PMID: 11356486.

    Book Chapters -

    Farris AB, Cornell LD, and Colvin RB. Pathology of Kidney Transplantation. In: Morris PJ and Knechtle SJ. Kidney Transplantation: Principles and Practice. 7th ed. Philadelphia, PA: Elsevier Saunders, 2014.

    Bastürk O, Farris AB, Adsay NV. Immunohistology of Pancreatic, Ampullary, and Liver Lesions.In: Dabbs DJ. Diagnostic Immunohistochemistry: Theranostic and Genomic Applications. 3RD edition: Philadelphia, PA: Saunders, 2010, and 4th edition: Philadelphia, PA: Elsevier Saunders, 2014.

    Farris AB and Miller DV. Hypertensive Renovascular Disease. In: Miller DV, Revelo MP, Butany J, Fyfe B, Larsen BT, Maleszewski JJ. Diagnostic Pathology: Cardiovascular. Salt Lake City, UT: Lippincott Williams & Wilkins / AMIRSYS. 2014.

    Farris AB and Mengel MH. Histopathological Syndromes of Kidney Allograft Rejection and Recurrent Disease. In: Kirk AD, Larsen CP, Madsen JC, Pearson TC, and Webber SA. Textbook of Organ Transplantation. Hoboken, NJ: John Wiley and Sons, Ltd., 2014.

    Farris AB and Miller DV. Fibromuscular Dysplasia. In: Miller DV, Revelo MP, Butany J, Fyfe B, Larsen BT, Maleszewski JJ. Diagnostic Pathology: Cardiovascular. Salt Lake City, UT: Lippincott Williams & Wilkins / AMIRSYS. 2014.

    Farris AB, Selig M, and Nielsen GP. Electron Microscopy of Infectious Disease. In: RL Kradin. Surgical Pathology of Infectious Disease. St. Louis, MO: Elsevier. [Chapter in press]

    Farris AB and Nielsen GP. Genitourinary Infectious Disease Pathology. In: RL Kradin. Surgical Pathology of Infectious Disease. St. Louis, MO: Elsevier. [Chapter in press]

    Kradin RL and Farris AB. Case 4: Mixed fungal infection in an immunocompromised patient. in: A. Zembowicz. Critical Diagnoses in Dermatopathology. Queensland, Australia.: Knowledge Books and Software. 2007.

    Books Edited and Written -

    Colvin RB, Chang A, Farris AB, Kambham N, Cornell LD, Meehan SM, Liapis H, Gaut JP, Bonsib SM, Seshan SV, Jain S, Larsen CP. Diagnostic Pathology: Kidney Diseases. 2nd ed. Philadelphia, PA: Elsevier, 2016.

    Chang A [lead], Husain AN, Gordon IO, Raganathan S, Cornell LD, Farris AB, Pogoriler J, Seshan SV, Pai RK, Gandhi MJ, Westerhoff M, Ahn J, Hart J, Wang HL, Yerian L, Ananthanarayanan V, Abraham RS, Kambham N, Bracamonte ER, Meehan SM, Langman L, Colvin RB, Akki A, Cendales L, Yeh MM. Diagnostic Pathology: Transplant Pathology. Salt Lake City, UT: Lippincott Williams & Wilkins / AMIRSYS. 2014.

    Colvin RB [lead], Chang A, Farris AB, Kambham N, Cornell LD, Meehan SM, Liapis H, Gaut J, Bonsib SM, Seshan SV, Vasilyev A, Jain SJ. Diagnostic Pathology: Renal Disease. Salt Lake City, UT: Lippincott Williams & Wilkins / AMIRSYS. 2011.

    Other Publications -

    AB Collins, AB Farris, RN Smith, CD Adams, PA Della Pelle, S Saidman, W Wong, RB Colvin. Challenges in the Diagnosis of Chronic Antibody Mediated Rejection Due to Loss of Peritubular Capillaries and Low Extent and Transient Nature of C4d Deposition. Laboratory Investigation. 89:1s (January 2009). 302A:1364. Boston, MA: United States and Canadian Academy of Pathology, March 4, 2009.

    G Soucy, JF Schmidt, JA Greenberg, S Cerda, K Dendrinos, F Farraye, AB Farris, GY Lauwers, HH Wang, RD Odze. Colonic Crohn's Disease: A Clinical/Pathologic and Outcome Study of 120 Patients. Laboratory Investigation. 89:1s (January 2009). 302A:669. Boston, MA: United States and Canadian Academy of Pathology, March 4, 2009

    RV Mandal, K Notohara, V Deshpande, AB Farris, M Lisovsky, TC Smyrk, GY Lauwers, M Mino-Kenudson. Foxp3 and IgG4 Expression in Subtypes of Autoimmune Pancreatitis. Laboratory Investigation. 89:1s (January 2009). 302A:1429. Boston, MA: United States and Canadian Academy of Pathology, March 4, 2009.

    AB Collins, AB Farris, W Wong, S Saidman, N Tolkoff-Rubin, NB Goes, DS Ko, AB Cosimi, RB Colvin. De Novo Membranous Glomerulonephritis Is Associated with C4d Depostion in Peritubular Capillaries and Basement Membrane Multilamination: Putative Variant of Chronic Humoral Rejection. Laboratory Investigation. 89:1s (January 2009). 302A:1363. Boston, MA: United States and Canadian Academy of Pathology, March 4, 2009.

    AB Farris, J Gaut, W Wong, P Della Pelle, N Brousaides, AB Collins, S Saidman, EE Schneeberger, RN Smith, RB Colvin. Pathology, Serology and Clinical Characteristics of 68 Patients with Chronic Humoral Renal Allograft Rejection (CHR). Laboratory Investigation. 89:1s (January 2009). 302A:1369. Boston, MA: United States and Canadian Academy of Pathology, March 4, 2009

    AB Farris, CD Adams, N Brousaides, PA Della Pelle, AB Collins, E Moradi, P Grimm, RB Colvin. Novel Subtraction Morphometry Technique for Assessing Fibrosis in Renal Biopsies. Laboratory Investigation. 89:1s (January 2009). 302A:1368. Boston, MA: United States and Canadian Academy of Pathology, March 4, 2009.

    Farris AB, Turbiner J, Wu S, Nichols J, Wu C. Variability in the Gleason grading of poorly formed glands and the prediction of PSA failure from prostatic adenocarcinoma. Athens, Greece: International Congress of the International Academy of Pathology. October 15, 2008. Histopathology. 53 (Suppl. 1), 272-3.

    Saenz AJ, Lawlor M, Farris AB, Ko V. The Anatomy of a Trainee-driven Digital Atlas of Pathology. Pathological Society of Great Britain and Ireland, Winter Meeting, January 5th 2007, University College London, 2007.

    Hull MJ, Farris AB, Murphy EE, Laposata M, Flood J. Toxicology Interpretative Laboratory Service: A Pilot Program. MGH Clinical Research Day 2007. May 17, 2007.

    Farris AB and Branda JA. QuantiFERON-TB Gold Assay for Tuberculosis Infection. Clinical Microbiology Newsletter. 29:17, September 1, 2007.

    Farris A, Hughson MD, Young RJ, Bertram JF, & Hoy WE. Glomerular Number and Size in Autopsy Kidneys: Relationship to Birth Weight (Preliminary Findings). 2002 Annual Meeting of the United States and Canadian Academy of Pathology. Laboratory Investigation, 82:1148A, 2002.

    Farris A, Hughson MD, Bertram JF, Douglas-Denton R., & Hoy WE. Birth Weight is a Powerful Determinant of Total Nephron Number. 35th Annual Meeting of the American Society of Nephrology, October, 2002. Journal of the American Society of Nephrology. 13F-P0212, 2002.

    Farris AB, Woodling K, & Ward TJ. Synergistic Effects Using the Macrocyclic Antibiotics Vancomycin and Ristocetin A in Capillary Electrophoresis. American Chemical Society Spring Meeting, San Francisco, CA, undergraduate division, March 26-30, 2000.